Nextflow workflow report

[loving_golick] (resumed run)

Workflow execution completed successfully!
Run times
25-Feb-2020 10:26:42 - 25-Feb-2020 15:52:55 (duration: 5h 26m 13s)
  1573 succeeded  
  0 cached  
  0 ignored  
  0 failed  
Nextflow command
nextflow run -c /home/jlsmith3/nextflow.config -work-dir 's3://fh-pi-meshinchi-s/SR/work' -with-report RBD_b12_report.html -cache TRUE -resume kallisto.nf --sample_sheet /home/jlsmith3/scripts/batch_pipeline/sample_sheets/RBD_batch1_batch2_sample_sheet.txt --index 's3://fh-pi-meshinchi-s/SR/GRCh38.v29/gencode.v29_RepBase.v24.01.idx' --picard_out_dir 's3://fh-pi-meshinchi-s/SR/picard_fq2/' --kallisto_out_dir 's3://fh-pi-meshinchi-s/SR/kallisto_out/Batch12/'
CPU-Hours
1'561.6
Launch directory
/home/jlsmith3/scripts/batch_pipeline/nextflow
Work directory
s3://fh-pi-meshinchi-s/SR/work
Project directory
/home/jlsmith3/scripts/batch_pipeline/nextflow
Script name
kallisto.nf
Script ID
82714bf6720e0a9fb340725ccd580ecf
Workflow session
332321a8-b675-4663-bef9-ee75eb56484c
Workflow profile
standard
Nextflow version
version 19.10.0, build 5170 (21-10-2019 15:07 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Memory

Job Duration

I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)